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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6481109_6481636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6481109 - 6481636

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TATTCTGCAACA

Flanking Amino Acid:

SLRKKLKLPIGNWLKRSSLS

Intron Amino Acid Position:

1022

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

0.65

1.5

85.7

34.9

Major PPT

71.3

0.48

66.5

39.2

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

53.7

0.11

2.2

72.71

39.3

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005983

6452528 - 6570138

117611