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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6497566_6500200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6497566 - 6500200

Intron Length:

2635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

TCTTGCTCACCA

Flanking Amino Acid:

EDEEEDFLDDSTVNPTKCCC

Intron Amino Acid Position:

1265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.48

1.1

63.7

42.3

Major BPS

59.2

0.23

1.3

43.5

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

33.8

-1.8

3.2

45.2

43.7

Minor BPS

48.8

-0.1

2.2

67.11

45.4

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611