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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6500335_6503162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6500335 - 6503162

Intron Length:

2828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

GGTTGCACATCT

Flanking Amino Acid:

MPRPRTEPLVDLESCRLRLD

Intron Amino Acid Position:

1310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

67.6

0.44

1.2

Major PPT

62.1

0.27

55.4

39.6

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

41.6

-0.5

2.3

63.15

46.1

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611