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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6520735_6521763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6520735 - 6521763

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

TTCTTCCTGACA

Flanking Amino Acid:

VQDPINEDQSKSFSARAVSR

Intron Amino Acid Position:

1720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.3

43.2

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

79.5

0.66

0.9

76.3

32.4

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

62.5

0.39

1.7

74.65

36.8

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611