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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6523855_6525549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6523855 - 6525549

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACTGACC

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTCTGTTTTACA

Flanking Amino Acid:

DGEVREDGVAVSAVAQQVLW

Intron Amino Acid Position:

1873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.1

56.2

40.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

88.4

0.86

0.7

83.2

Minor 5ss

32.7

-2

3.3

41.1

40.1

Minor BPS

54.2

0.13

2.1

70.65

41.9

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611