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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6529734_6530716_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6529734 - 6530716

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTAC

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TGACACTGATCA

Flanking Amino Acid:

EKGQELIQKQVFTRKLEEVG

Intron Amino Acid Position:

2093

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

35.7

Major BPS

0.57

1.2

41.2

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

57.5

0.25

69.7

41.2

Minor BPS

45.9

-0.3

1.8

57.28

40.9

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611