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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6534552_6535262_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6534552 - 6535262

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

GTCATTGAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TGTCATTGAAAC

Flanking Amino Acid:

ASVAPLLEFPDATNNGTSKG

Intron Amino Acid Position:

2288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

62.4

0.31

32.1

Major PPT

59.7

0.22

1.1

54.4

43.9

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

47.9

-0.1

1.7

60.41

37.7

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611