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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6538353_6540069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6538353 - 6540069

Intron Length:

1717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTAAAACT

Flanking Amino Acid:

NHTMSAGVNTRYPEQGAKLH

Intron Amino Acid Position:

2454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.1

0.86

0.6

87.5

22.8

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

0.17

1.9

76.89

39.8

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005983

6452528 - 6570138

117611

ENSAPLT00000005998

6452528 - 6570138

117611