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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6540106_6541716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6540106 - 6541716

Intron Length:

1611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

TTGTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

PEQGAKLHFIRENLHLLEEG

Intron Amino Acid Position:

2466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.4

36.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.1

0.72

0.9

73.5

41.8

Minor 5ss

34.3

-1.8

3.5

46.3

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005983

6452528 - 6570138

117611

ENSAPLT00000005998

6452528 - 6570138

117611