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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6541936_6545145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6541936 - 6545145

Intron Length:

3210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCCAC

5'SS Class:

major

3'SS Sequence:

AGCCTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCCCTCTTAACA

Flanking Amino Acid:

LELLDVKSHMRLAEIAHSLL

Intron Amino Acid Position:

2539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

57.8

41.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

62.3

0.28

57.8

42.6

Minor 5ss

44.3

-0.6

2.8

59.2

45.5

Minor BPS

70.9

0.65

1.3

72.02

40.3

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611