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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6550220_6552085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6550220 - 6552085

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TATTACTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AATTGTTTAATC

Flanking Amino Acid:

VVRLVALQIQALKEDFPLSH

Intron Amino Acid Position:

2690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.47

65.1

40.6

Minor 5ss

38.5

-1.3

2.9

47.2

Minor BPS

62.1

0.36

1.7

69.54

36.2

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005983

6452528 - 6570138

117611

ENSAPLT00000005998

6452528 - 6570138

117611