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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6553172_6554505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6553172 - 6554505

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CACCTCTGACTG

Flanking Amino Acid:

AESTSQAAYLALKVILVCFE

Intron Amino Acid Position:

2800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

32.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

72.5

0.51

0.9

67.3

34.2

Minor 5ss

28.5

-2.5

3.2

31.7

42.6

Minor BPS

41.8

-0.7

1.6

37.85

39.1

Associated Gene:

Gene:

UNC80

Ensembl Gene ID:

ENSAPLG00000005783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005998

6452528 - 6570138

117611

ENSAPLT00000005983

6452528 - 6570138

117611