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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6573131_6573202_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6573131 - 6573202

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

GGCCGCCCCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCGCCCTGACG

Flanking Amino Acid:

RRRLGQEPFFDMHMMVARPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

61.8

43.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

59.1

0.2

0.9

50.2

34.1

Minor 5ss

37.2

-1.5

3.4

50.7

Minor BPS

46.6

-0.4

1.9

47.81

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019740

6572818 - 6575012

2195