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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6573790_6574218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6573790 - 6574218

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TAATATCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTTTAATATCT

Flanking Amino Acid:

GPDTIHKCAEAGANMIVSGS

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

76.2

0.59

66.6

44.3

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

48.3

-0

2.1

74.81

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005942

6572756 - 6575012

2257

ENSAPLT00000019740

6572818 - 6575012

2195