Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_6595886_6607692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6595886 - 6607692

Intron Length:

11807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCCT

5'SS Class:

major

3'SS Sequence:

TGTATCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GAGAAATTAACC

Flanking Amino Acid:

MHGACYWNQQTSPSRDASFP

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

1.1

66.3

45.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

73.3

0.53

66.9

39.4

Minor 5ss

39.1

-1.2

3.4

47.3

Minor BPS

-0.1

1.8

56.06

41.1

Associated Gene:

Gene:

KANSL1L

Ensembl Gene ID:

ENSAPLG00000005351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005550

6594742 - 6637349

42608