Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_6612604_6615719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6612604 - 6615719

Intron Length:

3116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CGTTTTTTATTT

Flanking Amino Acid:

TLLLRNIEKQSAQLSEIISS

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.95

0.7

84.8

35.4

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

57.6

0.32

1.6

71.36

40.7

Associated Gene:

Gene:

KANSL1L

Ensembl Gene ID:

ENSAPLG00000005351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005550

6594742 - 6637349

42608