Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_6668170_6668659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6668170 - 6668659

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTGCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TAAGAATTAACC

Flanking Amino Acid:

AELRHVLATLGEKMTEEEVD

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

38.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

75.9

0.58

0.9

66.2

40.2

Minor 5ss

30.4

-2.2

3.6

46.9

Minor BPS

50.2

-0

1.9

63.15

41.4

Associated Gene:

Gene:

MYL1

Ensembl Gene ID:

ENSAPLG00000004615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026667

6667516 - 6674119

6604

ENSAPLT00000004759

6667516 - 6684546

17031