Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_6670360_6673724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6670360 - 6673724

Intron Length:

3365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CTTGATTTAACC

Flanking Amino Acid:

LQSFTPDQINDFKEAFLLFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

86.6

0.82

0.7

24.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

62.1

0.36

1.6

70.69

Associated Gene:

Gene:

MYL1

Ensembl Gene ID:

ENSAPLG00000004615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042657

6666402 - 6674536

8135

ENSAPLT00000035206

6668439 - 6674536

6098

ENSAPLT00000026667

6667516 - 6674119

6604