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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6673478_6684420_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6673478 - 6684420

Intron Length:
10943

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATGGA

5'SS Class:
strong_major

3'SS Sequence:
TTCCTTCCAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TTTTTTGTGATT

Flanking Amino Acid:
EPAIDLKSIKIEFSKEQQDD

Intron Amino Acid Position:
43

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.3
0.83
0.9
74.8
35.6

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
77.4
0.62
0.8
73.6
30

Minor 5ss
31.4
-2.1
3.2
40.8
45.4

Minor BPS
57
0.3
2
81.5
34.7

Associated Gene:

Gene:
MYL1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6667516 - 6684546
17031