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Intron Name: Anas_platyrhynchos_platyrhynchos_7_673043_686125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

673043 - 686125

Intron Length:

13083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TCTCTTTTAACA

Flanking Amino Acid:

RWYKKYKKIKVERVERENLS

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

83.3

0.75

0.8

80.3

30.3

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

72.5

0.7

1.2

75.92

35.5

Associated Gene:

Gene:

SATB2

Ensembl Gene ID:

ENSAPLG00000008131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008446

611837 - 740028

128192