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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6754483_6755344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6754483 - 6755344

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGTG

5'SS Class:

major

3'SS Sequence:

CTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TCATTCTTCAGT

Flanking Amino Acid:

RRFLESDGIKVSGLLVLDYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

69.7

40.9

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

32.9

-2

3.6

46.5

48.8

Minor BPS

0.14

2.1

71.66

45.5

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025