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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6762754_6763754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6762754 - 6763754

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCGG

5'SS Class:

strong_major

3'SS Sequence:

GATTTTCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTTGTCTTACCC

Flanking Amino Acid:

KYNVIRLLVKRGAEVHLVPW

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

63.6

48.1

Major BPS

0.72

38.9

Major PPT

78.2

0.64

0.9

69.7

41.2

Minor 5ss

32.2

-2

3.1

40.9

45.4

Minor BPS

58.8

0.25

1.8

69.02

43.1

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025