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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6764911_6767064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6764911 - 6767064

Intron Length:

2154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTTTTTGTATTC

Flanking Amino Acid:

FVNANDQTNEGIMHETRPIF

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

80.3

0.68

0.9

74.1

36.5

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

48.9

-0.1

2.2

68.82

37.9

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025