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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6769418_6772945_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6769418 - 6772945

Intron Length:

3528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TAATGCAGATTT

Flanking Amino Acid:

SGSQAVKAMKEENVKTVLMN

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

-0.6

2.2

60.13

43.1

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025