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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6773136_6773698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6773136 - 6773698

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

CAGCCCTCAAAG

Flanking Amino Acid:

GMGGQTALNCGVELFKQGVL

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.1

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

80.4

0.68

0.9

73.8

36.9

Minor 5ss

31.1

-2.2

2.6

35.6

40.5

Minor BPS

47.4

-0.3

1.8

47.95

44.6

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025