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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6777480_6777856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6777480 - 6777856

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGACAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGCTTCTCATTT

Flanking Amino Acid:

ENIDAMGVHTGDSVVVAPSQ

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

61.9

0.27

1.1

56.2

42.9

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

49.8

0.07

1.8

68.21

43.2

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025