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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6778068_6780759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6778068 - 6780759

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TGTTCTCTACCT

Flanking Amino Acid:

RSSALASKATGYPLAFIAAK

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

71.3

0.48

68.1

37.5

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

58.4

0.34

81.32

40.3

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025