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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6795152_6796993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6795152 - 6796993

Intron Length:

1842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

TTCTGCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GGACAAGTAACA

Flanking Amino Acid:

RKNIAPWVKKIDTLAAEYPA

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

80.1

0.68

0.8

73.7

31.3

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

40.6

-0.7

2.2

50.26

39.6

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025