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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6797060_6797621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6797060 - 6797621

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAC

U12 Branch Point Sequence:

CAGACCCTAATG

Flanking Amino Acid:

NYLYVTYSGQEHDVKFDDCG

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

0.42

1.1

57.7

Major PPT

78.2

0.64

0.7

76.1

25.9

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

48.3

-0.2

1.8

49.97

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025