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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6797686_6800670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6797686 - 6800670

Intron Length:

2985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CCTTGCCCACTT

Flanking Amino Acid:

MVLGCGPYHIGSSVEFDWCA

Intron Amino Acid Position:

933

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

73.6

0.53

69.6

36.7

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

38.8

-0.7

2.3

56.02

46.7

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025