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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6800853_6806230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6800853 - 6806230

Intron Length:

5378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TTGGACGTGACT

Flanking Amino Acid:

ERILDIYQYEGCSGCIISVG

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

71.3

0.48

0.9

34.7

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

47.4

-0.1

2.3

71.72

45.5

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025