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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6806426_6806969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6806426 - 6806969

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCTTGTTCACA

Flanking Amino Acid:

QAPWKAVSTLRDAVEFAGSV

Intron Amino Acid Position:

1059

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.56

0.8

72.8

32.1

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

49.4

-0

2.4

70.02

42.9

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025