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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6807038_6809140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6807038 - 6809140

Intron Length:

2103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GTCATTCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGT

Flanking Amino Acid:

PCLLRPSYVLSGSAMNVVFT

Intron Amino Acid Position:

1081

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.2

0.66

0.9

72.3

37.8

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

61.2

0.43

1.9

82.72

39.3

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025