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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6809217_6819562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6809217 - 6819562

Intron Length:

10346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGTA

5'SS Class:

major

3'SS Sequence:

GTCATCATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCATCATGACA

Flanking Amino Acid:

FLAEATRVSQDHPVVLTKFI

Intron Amino Acid Position:

1107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

66.3

39.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

63.6

0.31

1.1

57.8

Minor 5ss

38.5

-1.3

3.7

56.1

48.1

Minor BPS

49.3

-0

1.7

60.53

39.1

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025