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Intron Name: Anas_platyrhynchos_platyrhynchos_7_6828121_6831042_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6828121 - 6831042

Intron Length:

2922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TGCCTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTTTCCCCACTC

Flanking Amino Acid:

LRCEMASTGEVACFGEDVYS

Intron Amino Acid Position:

1281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

72.6

0.51

0.8

65.1

36.3

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

49.5

-0

2.1

71.38

40.1

Associated Gene:

Gene:

CPS1

Ensembl Gene ID:

ENSAPLG00000002474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002584

6750181 - 6837205

87025