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Intron Name: Anas_platyrhynchos_platyrhynchos_7_69370_69947_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
69370 - 69947

Intron Length:
578

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
GTTTTTGTTCAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
TTTAGTGTAACT

Flanking Amino Acid:
LCDKMELLCPLRKDIVTILT

Intron Amino Acid Position:
408

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
77.8
36.6

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
73.4
0.53
1.1
71.5
43.2

Minor 5ss
41.3
-1
2.8
62.9
41

Minor BPS
50.3
0.09
2.4
80.13
42.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69219 - 75666
6448