Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_7024238_7026470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7024238 - 7026470

Intron Length:

2233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

AATCTTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

MTPMRDKPKTDYLNPVEENP

Intron Amino Acid Position:

1157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.5

0.6

0.8

73.9

35.7

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

ERBB4

Ensembl Gene ID:

ENSAPLG00000001331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039311

7022801 - 7547705

524905

ENSAPLT00000001908

7022801 - 7547705

524905