About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_7050415_7052353_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7050415 - 7052353

Intron Length:
1939

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAATCTT

5'SS Class:
major

3'SS Sequence:
CTCTTCTGTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATTAT

U12 Branch Point Sequence:
ATGACTTCAAAT

Flanking Amino Acid:
FTHQSDVWSYGVTIWELMTF

Intron Amino Acid Position:
919

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.5
0.67
1
75.5
40.4

Major BPS
75.9
0.64
1
66.1
40.5

Major PPT
75.3
0.57
0.9
69
37.1

Minor 5ss
40
-1.1
3.2
59.5
44.9

Minor BPS
51.9
0.14
1.7
68.89
41.7

Associated Gene:

Gene:
ERBB4

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7022801 - 7547705
524905

7022801 - 7547705
524905