Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_7052430_7055133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7052430 - 7055133

Intron Length:

2704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TATTTCTAAGCT

Flanking Amino Acid:

EKEYNADGGKMPIKWMALEC

Intron Amino Acid Position:

894

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

87.7

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

79.4

0.66

0.8

37.3

Minor 5ss

32.8

-2

3.3

47.8

47.9

Minor BPS

59.9

0.39

1.9

80.69

41.2

Associated Gene:

Gene:

ERBB4

Ensembl Gene ID:

ENSAPLG00000001331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039311

7022801 - 7547705

524905

ENSAPLT00000001908

7022801 - 7547705

524905