Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_7163207_7164911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7163207 - 7164911

Intron Length:

1705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCATATTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAT

U12 Branch Point Sequence:

TCTTCCATATTC

Flanking Amino Acid:

EDNMITCYGPGPDHCTKCFH

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.1

35.7

Major BPS

61.6

0.29

1.1

57.2

40.1

Major PPT

74.7

0.56

0.9

65.4

40.6

Minor 5ss

31.2

-2.1

3.3

40.6

45.1

Minor BPS

57.4

0.21

1.9

71.03

40.7

Associated Gene:

Gene:

ERBB4

Ensembl Gene ID:

ENSAPLG00000001331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001908

7022801 - 7547705

524905

ENSAPLT00000039311

7022801 - 7547705

524905