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Intron Name: Anas_platyrhynchos_platyrhynchos_7_7830062_7833928_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

7830062 - 7833928

Intron Length:

3867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

ACAAAACCTGCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TCAGACTTAACA

Flanking Amino Acid:

AVSEASFCLQKITITDYCKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.8

-0

1.2

50.4

41.8

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

58.4

0.19

48.5

39.5

Minor 5ss

89.5

1.33

80.9

33.1

Minor BPS

62.8

0.4

1.7

69.13

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418