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Intron Name: Anas_platyrhynchos_platyrhynchos_7_7834448_7839001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7834448 - 7839001

Intron Length:

4554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGAATT

5'SS Class:

major

3'SS Sequence:

ATTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAGATTTTAATT

Flanking Amino Acid:

QEQTEDAHILALQSVLTSEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

80.1

32.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.6

0.73

0.9

79.4

37.5

Minor 5ss

41.3

-1

3.2

60.3

39.1

Minor BPS

57.3

0.31

1.3

64.67

40.7

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418