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Intron Name: Anas_platyrhynchos_platyrhynchos_7_7850305_7850900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7850305 - 7850900

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAG

U12 Branch Point Sequence:

TGTTGAGGAACT

Flanking Amino Acid:

EKNRLICDIKRLKAHYASYE

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

57.3

0.18

1.6

57.1

49.4

Major PPT

81.3

0.7

0.8

75.8

32.9

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

43.1

-0.4

2.6

70.98

45.3

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418