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Intron Name: Anas_platyrhynchos_platyrhynchos_7_7852479_7857451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7852479 - 7857451

Intron Length:

4973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ATTACATTAATG

Flanking Amino Acid:

GYAVQSPVTKAAHERKKGLE

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

88.7

0.87

0.7

85.2

29.2

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

62.5

0.26

1.7

68.14

39.2

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418