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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8102412_8116150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8102412 - 8116150

Intron Length:

13739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCACCATCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

TTTGTCTCCACC

Flanking Amino Acid:

SCNHATFNVKGDMIASCDSR

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

60.3

0.26

65.5

Major PPT

0.25

0.9

54.5

33.9

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

-0

2.1

69.77

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418