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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8116278_8217257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8116278 - 8217257

Intron Length:

100980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAACT

5'SS Class:

major

3'SS Sequence:

CTCTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTGCTCTGAATT

Flanking Amino Acid:

PANQAAFDYSGRTVAVASGD

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

70.8

39.2

Major BPS

69.8

0.49

37.5

Major PPT

74.5

0.55

0.9

70.2

39.1

Minor 5ss

34.9

-1.7

3.3

46.9

42.6

Minor BPS

0.52

1.4

77.93

38.6

Associated Gene:

Gene:

SPAG16

Ensembl Gene ID:

ENSAPLG00000015934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016623

7830019 - 8217436

387418