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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8208_8793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8208 - 8793

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

GTATCATTCATT

Flanking Amino Acid:

ELCLQQDPEKRPSASSLLSH

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

75.1

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

80.9

0.7

0.9

72.5

42.4

Minor 5ss

48.5

-0.1

2.8

43.2

Minor BPS

53.8

0.2

74.98

41.6

Associated Gene:

Gene:

STRADB

Ensembl Gene ID:

ENSAPLG00000014653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048196

7561 - 14454

6894

ENSAPLT00000015296

7561 - 14454

6894