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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8237293_8253993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8237293 - 8253993

Intron Length:

16701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCATTCCTACCA

Flanking Amino Acid:

PEQCCPVCKNGPNCFAGTTI

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.4

37.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

74.7

0.56

0.9

68.9

37.1

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

49.6

-0

1.9

64.21

42.2

Associated Gene:

Gene:

VWC2L

Ensembl Gene ID:

ENSAPLG00000015890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016569

8220603 - 8254142

33540