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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8341321_8342327_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8341321 - 8342327

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACAGCAC

5'SS Class:

weak_major

3'SS Sequence:

GTTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAG

U12 Branch Point Sequence:

TGAGGATAACAG

Flanking Amino Acid:

LATTKDFLQKRYGGWSFGMP

Intron Amino Acid Position:

1484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.23

1.1

48.7

41.9

Major BPS

45.4

-0.2

1.5

55.1

40.4

Major PPT

81.6

0.71

0.8

73.9

36.8

Minor 5ss

29.8

-2.3

3.5

41.2

45.6

Minor BPS

30.2

-1.6

2.1

30.97

40.6

Associated Gene:

Gene:

ABCA12

Ensembl Gene ID:

ENSAPLG00000014859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015556

8324130 - 8405805

81676