Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8370212_8370952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8370212 - 8370952

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCTTG

5'SS Class:

major

3'SS Sequence:

TCTGCAAACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAA

U12 Branch Point Sequence:

TACTCCTTGACA

Flanking Amino Acid:

ETSLPENSSHLISQILQLES

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

69.7

43.7

Major BPS

58.4

0.21

1.2

39.8

Major PPT

62.3

0.28

55.1

38.3

Minor 5ss

48.8

-0.1

2.8

63.8

41.2

Minor BPS

79.3

0.92

1.1

79.5

36.5

Associated Gene:

Gene:

ABCA12

Ensembl Gene ID:

ENSAPLG00000014859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015556

8324130 - 8405805

81676